Publications of Dr. Patrick Durand:

2006

* Durand P, Labarre L, Meil A, Divol J-L, Vandenbrouck Y, Viari A and Wojcik J (2006). GenoLink: a graph-based querying and browsing system for investigating the function of genes and proteins. BMC Bioinformatics. 7(21). (link).
* Durand P, Mahé F, Valin AS and Nicolas J (2006). Browsing repeats in genomes: Pygram and an application to non-coding region analysis. BMC Bioinformatics. 7(477). (link).


2005

* Durand P, Lavenier D, Leborgne M, Siegel A, Veber P and Nicolas J (2005). Applying complex models on genomic data. ERCIM News. 60:47-78. (link).
* Durand P, Labarre L, Meil A and Wojcik J (2005). GenoLink: discovering drug target proteins by exploring networks of heterogeneous biological data. ERCIM News. 60:31-32. (link).
* Meil A, Durand P and Wojcik J (2005). PIMWalker: visualizing protein interaction networks using the HUPO PSI Molecular Interaction Format. Applied Bioinformatics. 4(2):137-139. (link).
* Nicolas J, Durand P, Ranchy G, Tempel S and Valin AS (2005). Suffix-Tree ANalyser (STAN): looking for nucleotidic and peptidic patterns in chromosomes. Bioinformatics. 21(24):4408-10. (link).
* Durand P, Mahé F, Valin A-S and Nicolas J (2005). Pyramid diagram: visualizing the organization of repetitive sequences in genome. INRIA Research Report. no. RR-5798. (link).


2003

* Durand P, Medigue C, Morgat A, Vandenbrouck Y, Viari A, Rechenmann F (2003). Integration of data and methods for genome analysis. Curr Opin Drug Discov Devel. 6(3):346-52 (Review). (link).


2002

* Fabrega S, Durand P, Mornon JP, Lehn P (2002). Site actif de la beta-glucocerebrosidase humaine: prédiction structurale et validation expérimentale. J. Soc. Biol. 196(2):151-60 (Review).


2001

* Brooks DA, Fabrega S, Hein LK, Parkinson EJ, Durand P, Yogalingam G, Matte U, Giugliani R, Dasvarma A, Eslahpazire J, Henrissat B, Mornon JP, Hopwood JJ, Lehn P (2001). Glycosidase active site mutations in human alpha-L-iduronidase. Glycobiology. 11(9):741-50. (link).


2000

* Fabrega S, Durand P, Codogno P, Bauvy C, Delomenie C, Henrissat B, Martin BM, McKinney C, Ginns EI, Mornon JP, Lehn P (2000). Human glucocerebrosidase: heterologous expression of active site mutants in murine null cells. Glycobiology. 10(11):1217-24. (link).
* Durand P, Fabrega S, Henrissat B, Mornon JP, Lehn P (2000). Structural features of normal and mutant lysosomal glycoside hydrolases deduced from bioinformatics analysis. Human Molecular Genetics. 9(6):967-77 (Review). (link).


1998

* Calmels T, Callebaut I, Léger I, Durand P, Bril A, Mornon JP, Souchet M (1998). Sequence and 3D structural relationships between mammalian Ras and Rho specific GTPase-activating proteins (GAP) : the cradle fold. FEBS lett. 426(2):205-211.
* Mornon JP, Halaby D, Malfois M, Durand P, Callebaut I and Tardieu A (1998). a-Crystallin C-terminal domain : on the track of an Ig fold. Int. J. Biol. Macromol. 22(3-4):219-27.


1997

* Callebaut I, Labesse G, Durand P, Poupon A, Canard L, Chomilier J, Henrissat B and Mornon JP (1997). Deciphering protein sequence information through Hydrophobic Cluster Analysis (HCA) : current status and perspectives. Cell. mol. life sci. 53:621-645 (Review).
* Dujon B, ... , Durand P, ... , Kleine K (1997). The complete nucleotide sequence of yeast chromosome XV. Nature. 387(suppl.):98-102. (link).
* Durand P, Lehn P, Callebaut I, Fabrega S, Henrissat B and Mornon JP (1997). Active-site motifs of lysosomal acid hydrolases: invariant features of Clan GH-A glycosyl hydrolases deduced from Hydrophobic Cluster Analysis. Glycobiology. 7(2):277-284. (link).
* Durand P, Canard L and Mornon JP (1997). Visual BLAST and Visual FASTA : graphic workbenches for interactive analysis of full BLAST and FASTA outputs under Microsoft Windows 95/NT. Bioinformatics. 13(4):407-413. (link).
* Tettelin H, ... , Durand P, ... , Kleine K (1997). The nucleotide sequence of Saccharomyces cerevisiae chromosome VII. Nature. 387(suppl.):81-84. (link).


1996

* Galibert F, ... , Durand P, ... , Karpfinger-Hartl L (1996). Complete nucleotide sequence of Saccharomyces cerevisiae chromosome X. EMBO J. 15:2031-2049. (link).


1995

* Vandenbol M, Durand P, Dion C, Portetelle D, Hilger F (1995). Sequence of a 17.1 kb DNA fragment from chromosome X of Saccharomyces cerevisiae includes the mitochondrial ribosomal protein L8. Yeast. 11:57-60. (link).
* Vandenbol M, Durand P, Portetelle D, Hilger F (1995). Sequence analysis of a 44 kb DNA fragment of yeast chromosome XV including the Tyl-H3 retrotransposon, the suf1(+) frameshift suppressor gene for tRNA-Gly, the yeast transfer RNA-Thr-1a and a delta element. Yeast. 11:1069-1075. (link).
* Vandenbol M, Durand P, Portetelle D, Hilger F (1995). The sequence of an 11.1 kb DNA fragment between ADH4 and ADE5 on the left arm of chromosome VII reveals the presence of eight open reading frames. Yeast. 11:1519-1523. (link).


1994

* Vandenbol M, Durand P, Bolle PA, Dion C, Portetelle D, Hilger F (1994). Sequence analysis of a 40.2 kb DNA fragment located near the left telomere of yeast chromosome X. Yeast. 10:1657-1662. (link).