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Can I use ngKLAST with local copies of public Blast databanks ?
Yes. ngKLAST provides you with a graphical interface over the Blast suite of softwares. With this you can: 1. prepare your personal Blast databanks out of your sequences files; 2. install locally a public sequence databank retrieved elsewhere. You can install a local copy of SwissProt, for example; 3. combine the above two options. Then, you can prepare Blast sequence databanks integrating your personal sequences with public ones. 4. install locally a pre-formatted sequence databank, such as the ones available from the NCBI, 5. run Blast searches within a few mouse clicks against the databanks installed using the above options.
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