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The Korilog Bioinformatics Extension for Knime |
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Main Features
Databank Installation
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- Automatic deployment from remote servers
- Install public databanks (NCBI, EMBL, Uniprot,...)
- Prepare personal databanks
- Setup annotated Blast databanks
- Manage sequences, annotations and biological classifications
- Prepare taxonomic subsets from public databanks
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Bioinformatics Workflow Design
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- Load query sequence files
- Load existing Blast data files
- Setup multi-threaded Blast comparison jobs
- Annotate Blast results with qualified data sets
- Filter results using Blast and/or annotation data
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Analyse and Visualize
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- Use Knime provided data analysis and visualization tools
- Use Knime extended data analysis nodes (e.g. "R" statistical package)
- Use Korilog data visualisation tools (e.g. KoriViewer)
- Export Blast results and annotation in various formats (text, xml, csv, html)
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High-performance ready
The Korilog Bioinformatics Extension for Knime is fully compatible with the Cluster Extension of KNIME. Configure your Blast workflow and run it on your cluster in a few mouse clicks.
System requirements
Contact us to discuss with you the opportunities of using our Knime extension for your research work.
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